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Yes, save out WAV separate from video-only AVI, for the best experience. Be sure to select NO AUDIO when doing the AVI save -- it's under the audio menu in VirtualDub. And then do FULL PROCESSING mode when saving out the WAV only. Go to File > SAVE WAV for that process. You simply import both streams separate in Premiere. Drop video on video timeline, audio on audio timeline. There should not be sync issues unless you don't line them up on the timeline. Zoom in to 1-frame distance to really check. Note that sometimes audio or video may be a few frames different in length, not an issue.
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